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Rice, Phoebe A.
One or more keywords matched the following properties of
Rice, Phoebe A.
Property
Value
keywords
Biochemistry
overview
How do mobile genetic elements jump? We use biochemistry, structural biology, and microbiology to get mechanistic answers. Projects include the SCCmec element of MRSA and the paradigmatic Mu transposase.
One or more keywords matched the following items that are connected to
Rice, Phoebe A.
Item Type
Name
Concept
Bacterial Outer Membrane Proteins
Concept
Bacterial Proteins
Concept
Complement System Proteins
Concept
Fungal Proteins
Concept
DNA-Binding Proteins
Concept
Membrane Proteins
Concept
Protein Binding
Concept
Protein Conformation
Concept
Proteins
Concept
Repressor Proteins
Concept
Protein Biosynthesis
Concept
Protein Structure, Quaternary
Concept
Protein Subunits
Concept
Protein Structure, Tertiary
Concept
Protein Transport
Concept
Xenopus Proteins
Concept
Protein Structure, Secondary
Concept
Protein Folding
Concept
Green Fluorescent Proteins
Concept
Saccharomyces cerevisiae Proteins
Concept
Recombinant Proteins
Concept
Ribosomal Proteins
Concept
Protein Interaction Domains and Motifs
Concept
Protein Multimerization
Concept
Homeodomain Proteins
Concept
Mutant Proteins
Concept
Escherichia coli Proteins
Concept
Intracellular Signaling Peptides and Proteins
Concept
Carrier Proteins
Concept
Recombinant Fusion Proteins
Concept
Retroviridae Proteins
Academic Article
Protein-protein interactions directing resolvase site-specific recombination: a structure-function analysis.
Academic Article
Retroviral integrases and their cousins.
Academic Article
Crystal structure of an IHF-DNA complex: a protein-induced DNA U-turn.
Academic Article
Crystal structure of a Flp recombinase-Holliday junction complex: assembly of an active oligomer by helix swapping.
Academic Article
Holding damaged DNA together.
Academic Article
Crystallization and preliminary X-ray study of the edema factor exotoxin adenylyl cyclase domain from Bacillus anthracis in the presence of its activator, calmodulin.
Academic Article
Structural plasticity of the Flp-Holliday junction complex.
Academic Article
New insight into site-specific recombination from Flp recombinase-DNA structures.
Academic Article
Integration host factor: putting a twist on protein-DNA recognition.
Academic Article
Visualizing Mu transposition: assembling the puzzle pieces.
Academic Article
Flexible DNA bending in HU-DNA cocrystal structures.
Academic Article
Structure-based analysis of HU-DNA binding.
Academic Article
The crystal structure of the catalytic domain of the site-specific recombination enzyme gamma delta resolvase at 2.7 A resolution.
Academic Article
Resolving integral questions in site-specific recombination.
Academic Article
Mechanisms of site-specific recombination.
Academic Article
Crystal structure of a Rad51 filament.
Academic Article
Shaping the Borrelia burgdorferi genome: crystal structure and binding properties of the DNA-bending protein Hbb.
Academic Article
IHF and HU: flexible architects of bent DNA.
Academic Article
Protein binding has a large effect on radical mediated DNA damage.
Academic Article
Inter-subunit interactions that coordinate Rad51's activities.
Academic Article
Sin resolvase catalytic activity and oligomerization state are tightly coupled.
Academic Article
Identification of a potential general acid/base in the reversible phosphoryl transfer reactions catalyzed by tyrosine recombinases: Flp H305.
Academic Article
Amino acid residues in Rag1 crucial for DNA hairpin formation.
Academic Article
Cooperativity mutants of the gamma delta resolvase identify an essential interdimer interaction.
Academic Article
Regulatory mutations in Sin recombinase support a structure-based model of the synaptosome.
Academic Article
Control of transposase activity within a transpososome by the configuration of the flanking DNA segment of the transposon.
Academic Article
Regulation of Rad51 function by phosphorylation.
Academic Article
Mapping the transition state for DNA bending by IHF.
Academic Article
Structural basis for catalytic activation of a serine recombinase.
Academic Article
The structure of the human AGT protein bound to DNA and its implications for damage detection.
Academic Article
Structure of the LexA-DNA complex and implications for SOS box measurement.
Academic Article
Ribosomal protein L7/L12 has a helix-turn-helix motif similar to that found in DNA-binding regulatory proteins.
Academic Article
Automated real-space refinement of protein structures using a realistic backbone move set.
Academic Article
Structure of the bacteriophage Mu transposase core: a common structural motif for DNA transposition and retroviral integration.
Academic Article
Binding and catalytic contributions to site recognition by flp recombinase.
Academic Article
Architecture of a serine recombinase-DNA regulatory complex.
Academic Article
The phage Mu transpososome core: DNA requirements for assembly and function.
Academic Article
Refinement of gamma delta resolvase reveals a strikingly flexible molecule.
Academic Article
The ยต transpososome structure sheds light on DDE recombinase evolution.
Academic Article
Structure of the binding site for nonnucleoside inhibitors of the reverse transcriptase of human immunodeficiency virus type 1.
Academic Article
Making DNA do a U-turn: IHF and related proteins.
Academic Article
Model for a DNA-mediated synaptic complex suggested by crystal packing of gamma delta resolvase subunits.
Academic Article
Comparative architecture of transposase and integrase complexes.
Academic Article
The role of the conserved Trp330 in Flp-mediated recombination. Functional and structural analysis.
Academic Article
An oxidation-sensing mechanism is used by the global regulator MgrA in Staphylococcus aureus.
Academic Article
Crystal structures of DNA/RNA repair enzymes AlkB and ABH2 bound to dsDNA.
Academic Article
Orchestrating serine resolvases.
Academic Article
Crystal structure at 3.5 A resolution of HIV-1 reverse transcriptase complexed with an inhibitor.
Academic Article
A helix-turn-strand structural motif common in alpha-beta proteins.
Academic Article
Structural basis of asymmetry in the human immunodeficiency virus type 1 reverse transcriptase heterodimer.
Academic Article
Roles of two large serine recombinases in mobilizing the methicillin-resistance cassette SCCmec.
Academic Article
A G-quadruplex-containing RNA activates fluorescence in a GFP-like fluorophore.
Academic Article
Arginine as a general acid catalyst in serine recombinase-mediated DNA cleavage.
Academic Article
Deciphering the Roles of Multicomponent Recognition Signals by the AAA+ Unfoldase ClpX.
Academic Article
Crystal structure of the Varkud satellite ribozyme.
Academic Article
The contrasting mechanisms of serum resistance of Neisseria gonorrhoeae and group B Neisseria meningitidis.
Academic Article
Complement processing and immunoglobulin binding to Neisseria gonorrhoeae determined in vitro simulates in vivo effects.
Academic Article
Staphylococcal SCCmec elements encode an active MCM-like helicase and thus may be replicative.
Academic Article
Two-step interrogation then recognition of DNA binding site by Integration Host Factor: an architectural DNA-bending protein.
Academic Article
Snapshots of a molecular swivel in action.
Academic Article
Crystal Structure of an Unusual Single-Stranded DNA-Binding Protein Encoded by Staphylococcal Cassette Chromosome Elements.
Academic Article
Characterizing Watson-Crick versus Hoogsteen Base Pairing in a DNA-Protein Complex Using Nuclear Magnetic Resonance and Site-Specifically 13C- and 15N-Labeled DNA.
Academic Article
A conserved RNA structural motif for organizing topology within picornaviral internal ribosome entry sites.
Academic Article
Target highlights in CASP13: Experimental target structures through the eyes of their authors.
Academic Article
Structure of the P element transpososome reveals new twists on the DD(E/D) theme.
Academic Article
A novel DNA primase-helicase pair encoded by SCCmec elements.
Academic Article
The protein-protein interactions required for assembly of the Tn3 resolution synapse.
Concept
Protein Domains
Concept
Protein Conformation, alpha-Helical
Concept
Protein Conformation, beta-Strand
Concept
X-ray Repair Cross Complementing Protein 1
Concept
Poly-ADP-Ribose Binding Proteins
Academic Article
Crystal structure of a cap-independent translation enhancer RNA.
Search Criteria
Protein
Biochemistry